1352601184186 7fffb663120dd173020ed4b9bc223583

Penn Genomic Analysis Core

13 Orders Completed
Philadelphia, Pennsylvania, US

About Penn Genomic Analysis Core

The DNA Sequencing Facility is an Abramson Cancer Center Shared Resource that is approved and partially funded by the National Cancer Institute.

Our Services (30)


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Illumina Sequencing

Price on request
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DNA Sequencing Data Analysis

Price on request
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Whole Exome Sequencing (WES)

Price on request

Whole exome sequencing on Ion Torrent Proton sequencer. Up to 80 million reads and 12Gb throughput. Results in 1 - 3 weeks.

Whole exome sequencing on Ion Torrent Proton sequencer. Up to 80 million reads and 12Gb throughput. Results in 1 - 3 weeks.

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16S rRNA Sequencing

Price on request

16S rRNA sequencing on Ion Torrent PGM sequencer. Scalable throughput from 500k to 5m reads, and 100Mb to 1Gb. Results in 1-3 weeks.

16S rRNA sequencing on Ion Torrent PGM sequencer. Scalable throughput from 500k to 5m reads, and 100Mb to 1Gb. Results in 1-3 weeks.

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Genotyping and Gene Expression Assays

Price on request

Microsatellite-based Genotyping/Fragment Sizing on ABI 3130. Also available are: full service genotyping (including PCR, pooling, sizing and genotyping), LOH Analysis, SNaPshot, and mouse genotyping (for transgene identification). Please contact us for options and information.

Microsatellite-based Genotyping/Fragment Sizing on ABI 3130. Also available are: full service genotyping (including PCR, pooling, sizing and genotyping), LOH Analysis, SNaPshot, and mouse genotyping (for transgene identification). Please contact us for options and information.

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Ion Torrent Sequencing

Ion Torrent Next Generation Sequencing
Price on request

High throughput sequencing on Ion Torrent Proton and Personal Genome Machine instruments.

Proton sequencing: Up to 80m reads and 12Gb. Read lengths up to 200bp.

PGM sequencing: Scalable throughput from 500k to 5m reads and 100Mb to 1Gb per run. Read lengths up to 400bp.

High throughput sequencing on Ion Torrent Proton and Personal Genome Machine instruments.

Proton sequencing: Up to 80m reads and 12Gb. Read lengths up to 200bp.

PGM sequencing: Scalable throughput from 500k to 5m reads and 100Mb to 1Gb per run. Read lengths up to 400bp.

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Ion Torrent NGS Library Preparation

Price on request

AmpliSeq, 16S, and fragment libraries

AmpliSeq, 16S, and fragment libraries

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Microsatellite Instability Testing

Price on request

Microsatellite-based Genotyping/Fragment Sizing on ABI 3130. Also available are: full service genotyping (including PCR, pooling, sizing and genotyping), LOH Analysis, SNaPshot, and mouse genotyping (for transgene identification). Please contact us for options and information.

Microsatellite-based Genotyping/Fragment Sizing on ABI 3130. Also available are: full service genotyping (including PCR, pooling, sizing and genotyping), LOH Analysis, SNaPshot, and mouse genotyping (for transgene identification). Please contact us for options and information.

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NGS Data Analysis

Next generation sequencing data analysis
Price on request

Bioinformatic analysis including DNA-Seq variant calling, RNA-Seq differential expression, microarray analysis.

Bioinformatic analysis including DNA-Seq variant calling, RNA-Seq differential expression, microarray analysis.

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PCR

Price on request

PCR amplification, with optional purification via enzymatic cleanup (ExoSAP), spin column, SPRI bead, gel, or Pippinprep.

PCR amplification, with optional purification via enzymatic cleanup (ExoSAP), spin column, SPRI bead, gel, or Pippinprep.

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PCR Product Purification

Price on request

Purification of PCR amplicon via enzymatic cleanup (ExoSAP), spin column, SPRI bead, gel, or Pippinprep.

Purification of PCR amplicon via enzymatic cleanup (ExoSAP), spin column, SPRI bead, gel, or Pippinprep.

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Plasmid DNA Preparation

Price on request

Plasmid Miniprep, Midiprep, or Maxiprep.

Plasmid Miniprep, Midiprep, or Maxiprep.

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Sanger Sequencing

Price on request

Low throughput (<= 48 samples), high throughput (> 48 samples), and ready to load samples.

Low throughput (<= 48 samples), high throughput (> 48 samples), and ready to load samples.

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Site-Directed Mutagenesis

Price on request

Site-directed Mutation

Site-directed Mutation

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Molecular Cloning

Price on request

Plasmid subcloning and BAC recombineering. Targeting Vector Construction for gene targeting experiments including
conditional knock-out construct and knock-in construct.

Plasmid subcloning and BAC recombineering. Targeting Vector Construction for gene targeting experiments including
conditional knock-out construct and knock-in construct.

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DNA Sequencing

Price on request
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Sequencing Data Analysis and Management

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RNA Services

Price on request
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Nucleic Acid Analysis

Price on request
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Exome Sequencing Services

Price on request
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Nucleic Acid Services

Price on request
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DNA Services

Price on request
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Nucleic Acid Data Analysis

Price on request
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Targeted Gene Sequencing

Price on request
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Next Generation Sequencing (NGS)

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Mutagenesis

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Biochemistry & Molecular Biology

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DNA Library Preparation

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Plasmids and Vectors

Price on request
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Transgenic Genotyping

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Tapan Ganguly

Director
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Erik Toorens

Lab Manager
  • Positive review for RNA Services:

    September 2018

    "Penn Genomic Analysis Core was quick to respond to questions, easy to work with, and extremely fast in delivering the results (less than a day after sample submission). I would definitely recommend and will be using their services again!"

  • Positive review for Microsatellite Instability Testing:

    May 2018

    "Good communication and careful workers."

  • Positive review for Sanger Sequencing:

    August 2017

    "Timely, responsive, quality data and people!"

  • Positive review for Microsatellite Instability Testing:

    July 2017

    "Good communication, willing to troubleshoot and see the project to completion. Thank you."

  • Positive review for Site-Directed Mutagenesis:

    May 2017

    "Great communication, very helpful, and returned just what I wanted. Thanks"

  • Positive review for Ion Torrent Sequencing:

    October 2012

    "very professional, good quality data and rapid completion of project. highly recommended."

Penn Genomic Analysis Core has not received any endorsements.