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OnRamp Bioinformatics

ic 9.0/10 Overall Rating 100% Positive
ic 17 Orders Completed
San Diego, California, US

About OnRamp Bioinformatics

OnRamp Bioinformatics empowers researchers and biologists with results that they can put to action. Too often, simple questions consume months of time to only lead to more questions. We provide hands-on results presentation with intuitive and interactive reports, so you don’t have to wait on others for answers... Show more »

OnRamp Bioinformatics empowers researchers and biologists with results that they can put to action. Too often, simple questions consume months of time to only lead to more questions. We provide hands-on results presentation with intuitive and interactive reports, so you don’t have to wait on others for answers that matter most. For RNA-seq and ChIP-seq experiments, you can perform self-guided analyses without delay on our industry-leading Rosalind platform.

Expert Review of Molecular Diagnostics recognized our scientific team and advanced Rosalind Platform as best practices. Researchers globally entrust their research to us.

Our Full-Service Offerings include:
- Gene expression profiling, Pathway Analysis and Gene Ontology
- Single-Cell Gene Expression and Methylation analyses
- CRISPR Verification and Off-Target Screening
- Variant calling and interpretation for whole genome, exome or targeted studies
- Protein binding and methylation sites for epigenetics studies
- Virus and bacterial diversity and abundance and functional classification for microbiome studies

Selected Publications
- Davis-Turak et al."Genomics pipelines and data integration: challenges and opportunities in the research setting" Vol. 0 , Iss. Ja,0 Expert Review Of Molecular Diagnostics
- Gary Hardiman, et al. "Systems analysis of the prostate transcriptome in African–American men compared with European–American men" Pharmacogenomics, July 2016 ,Vol. 17, No. 10 , Pages 1129-1143 (doi: 10.2217/pgs-2016-0025)
- Elvis Genbo Xu, et al. "Time- and Oil-Dependent Transcriptomic and Physiological Responses to Deepwater Horizon Oil in Mahi-Mahi (Coryphaena hippurus) Embryos and Larvae" Environmental Science & Technology 2016 50 (14), 7842-7851 DOI: 10.1021/acs.est.6b02205
- Xu, E. G. et al. Novel transcriptome assembly and comparative toxicity pathway analysis in mahi-mahi (Coryphaena hippurus) embryos and larvae exposed to Deepwater Horizon oil. Sci. Rep. 7, 44546; doi: 10.1038/srep44546 (2017)

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Diversity Certificates

Small business

Our Services (60)


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Whole Genome Sequencing Data Analysis

Price on request

Advanced bioinformatics analysis and visual analytics for Whole Genome Sequencing (DNA-seq)
- Rapid analysis and interpretation of raw DNA-seq files (FASTQ) to identify single nucleotide variants (SNVs)
- Analysis available for single genome, trios, cohorts, or tumor-normal pairs
- Industry standard tools published in... Show more »

Advanced bioinformatics analysis and visual analytics for Whole Genome Sequencing (DNA-seq)
- Rapid analysis and interpretation of raw DNA-seq files (FASTQ) to identify single nucleotide variants (SNVs)
- Analysis available for single genome, trios, cohorts, or tumor-normal pairs
- Industry standard tools published in peer-reviewed journals
- Collaborate and share results across any extended research team

Deliverables
- Annotated list of variants
- Presentation and discussion of results with project lead

Recognized by Expert Review of Molecular Diagnostics, as a best practice in bioinformatics, OnRamp Bio streamlines data analyses with a leading scientific team, interactive software and dedicated cloud systems.

Focus on what to do with your results, as opposed to how to get them.

Turnaround Time
- Setup & Data Transfer: 1-2 days
- Analysis: 1-7 days (depends on quantity of samples)

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Big Data Software Architecture Human Mouse Rat Humanized Mouse Genome Analysis ToolKit GATK Private Cloud Servers Data Management Data Provenance Analysis Provenance Oncology Rare Disease Trimming Filtering High Performance Computing Variant Calling Tumor-Normal Pedigree DNA-Seq Whole Genome Sequencing Whole Genome Human tissue Biology Genomics Client-specified Filtered Variant List Damaging Variants Non-common Variants Rare Disease Variants Show 30 more tags Show less

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ChIP-Seq Data Analysis

Chromatin immunoprecipitation-sequencing data analysis
Starting at $60.00 per sample

ChIP-Seq Data Analysis & Data Storage
- Rapid analysis of raw chromatin immunoprecipitation sequencing ChIP-seq files (FASTQ) to identify regions of protein interaction with DNA
- Annotate and analyze motifs on the predicted binding regions
- Differential analysis of binding between conditions
- Industry standard tools... Show more »

ChIP-Seq Data Analysis & Data Storage
- Rapid analysis of raw chromatin immunoprecipitation sequencing ChIP-seq files (FASTQ) to identify regions of protein interaction with DNA
- Annotate and analyze motifs on the predicted binding regions
- Differential analysis of binding between conditions
- Industry standard tools published in peer-reviewed journals
- Collaborate and share results across any extended research team

Deliverables
- Intuitive results visualization with targeted data plots, charts, Venn diagrams, heatmaps and clustering that provide answers aligned with experimental objectives
- ChIP QC reports
- Peaks files
- Annotations and motif analysis
- Differentially bound regions / genes
- 30min presentation and discussion of results with project lead

Recognized by Expert Review of Molecular Diagnostics, as a best practice in bioinformatics, OnRamp Bio streamlines data analyses with a leading scientific team, interactive software and dedicated cloud systems.

Focus on what to do with your results, as opposed to how to get them.

Turnaround Time
- Setup & Data Transfer: 1-2 days
- Analysis: 1-5 days (depends on quantity of samples)

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Big Data Software Architecture Human Mouse Rat Private Cloud Servers Data Management Data Provenance Analysis Provenance Next Generation Sequencing Gene expression profiling ChIP-Seq Differential Expression Trimming Filtering High Performance Computing Data Visualization Data Validation Data Exploration Quality Control Biology Drug Discovery Genomics Gene List Filtered Gene List Illumina Show 25 more tags Show less

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Gene Expression Analysis

Starting at $60.00 per sample

Comprehensive gene expression profiling and analysis
- Rapid analysis and interpretation of raw RNA-seq (transcriptome) sequence files (FASTQ) to gain insights into target genes, and overall expression levels
- Comprehensive analysis of upregulation and downregulation of genes
- Differentially expressed genes across... Show more »

Comprehensive gene expression profiling and analysis
- Rapid analysis and interpretation of raw RNA-seq (transcriptome) sequence files (FASTQ) to gain insights into target genes, and overall expression levels
- Comprehensive analysis of upregulation and downregulation of genes
- Differentially expressed genes across samples, time series, treatments or any other condition or criteria
- Sort, filter and identify key patterns and pathways in highly expressed gene signatures
- Industry standard tools published in peer-reviewed journals
- Collaborate and share results across any extended research team

Deliverables
- Intuitive results visualization with targeted data plots, charts, Venn diagrams, heatmaps and clustering that provides answers aligned with experimental objectives
- Differentially expressed gene lists
- Gene expression level lists, charts, tables, CSV files
- Pathway Analysis
- Gene Ontology
- Disease and miRNA regulators
- 30min presentation and discussion of results with OnRamp project lead

Recognized by Expert Review of Molecular Diagnostics, as a best practice in bioinformatics, OnRamp Bio streamlines data analyses with leading scientific team, interactive software and dedicated cloud systems.

Focus on what to do with your results, as opposed to how to get them.

Turnaround Time
- Setup & Data Transfer: 1-2 days
- Analysis: 1-2 days (depends on quantity of samples)

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Big Data Software Architecture Human Mouse Rat Private Cloud Servers Data Management Data Provenance Analysis Provenance Next Generation Sequencing Bioinformatics pipelines Gene expression profiling Microarray RNA-Seq NGS NGS Panels Differential Expression Trimming Filtering mRNA-seq miRNA-seq Data Visualization Data Exploration Bioinformatics RNA sequencing Biology Drug Discovery Genomics Gene List Filtered Gene List Drug-Gene Regulation Show 30 more tags Show less

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Genetic Variant Analysis

Price on request

Comprehensive variant calling and analysis
- Rapid analysis and interpretation of raw DNA-seq files (FASTQ or BAM) to identify single nucleotide variants (SNVs)
- Industry standard tools published in peer-reviewed journals
- Collaborate and share results across any extended research team

Deliverables
- Annotated... Show more »

Comprehensive variant calling and analysis
- Rapid analysis and interpretation of raw DNA-seq files (FASTQ or BAM) to identify single nucleotide variants (SNVs)
- Industry standard tools published in peer-reviewed journals
- Collaborate and share results across any extended research team

Deliverables
- Annotated list of variants
- Presentation and discussion of results with project lead

Recognized by Expert Review of Molecular Diagnostics, as a best practice in bioinformatics, OnRamp Bio streamlines data analyses with a leading scientific team, interactive software and dedicated cloud systems.

Focus on what to do with your results, as opposed to how to get them.

Turnaround Time
- Setup & Data Transfer: 1-2 days
- Analysis: 1-7 days (depends on quantity of samples)

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Big Data Software Architecture Human Mouse Rat Private Cloud Servers Data Management Data Provenance Analysis Provenance Rare Disease Next Generation Sequencing Bioinformatics pipelines Trimming Filtering High Performance Computing Data Visualization Data Exploration DNA-Seq Bioinformatics Biology Drug Discovery Genomics Filtered Variant List Rare Disease Variants Gene List Filtered Gene List Show 25 more tags Show less

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MicroRNA (miRNA) Expression Profiling

Price on request

Comprehensive miRNA data analysis
- Rapid analysis of raw miRNA data files to gain insights into target genes, and overall expression levels
- Comprehensive analysis of upregulation and downregulation of genes, or downstream proteins
- Comparisons of differentially expressed genes across samples, time series, or any other... Show more »

Comprehensive miRNA data analysis
- Rapid analysis of raw miRNA data files to gain insights into target genes, and overall expression levels
- Comprehensive analysis of upregulation and downregulation of genes, or downstream proteins
- Comparisons of differentially expressed genes across samples, time series, or any other condition, or criteria
- Sort, filter and identify key patterns and pathways in highly expressed gene signatures
- Industry standard tools published in peer-reviewed journals
- Collaborate and share results across any extended research team

Deliverables
- Gene lists
- Interactive results visualization and exploration with dynamic data plots, charts, heatmaps and clustering
- Interactive Venn diagrams of gene lists to evaluate overall gene expression, including time series
- Target gene lists, charts, tables, CSV files
- Presentation and discussion of results with project lead

Recognized by Expert Review of Molecular Diagnostics, as a best practice in bioinformatics, OnRamp Bio streamlines data analyses with a leading scientific team, interactive software and dedicated cloud systems.

Focus on what to do with your results, as opposed to how to get them.

Turnaround Time
- Setup & Data Transfer: 1-2 days
- Analysis: 1-2 days (depends on quantity of samples)

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Human Mouse Rat Bioinformatics pipelines miRNA-seq Data Visualization Data Exploration Biology Drug Discovery Genomics Gene List Filtered Gene List Drug-Gene Regulation miRNA Show 14 more tags Show less

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DNA Methylation Analysis

Price on request

Comprehensive differential methylation analysis
- Rapid analysis of raw Methyl-seq or reduced representation bisulfite sequencing RRBS files (FASTQ) to identify methylation sites.
- Differential methylation analysis between conditions
- Industry standard tools published in peer-reviewed journals
- Collaborate and share... Show more »

Comprehensive differential methylation analysis
- Rapid analysis of raw Methyl-seq or reduced representation bisulfite sequencing RRBS files (FASTQ) to identify methylation sites.
- Differential methylation analysis between conditions
- Industry standard tools published in peer-reviewed journals
- Collaborate and share results across any extended research team

Deliverables
- Intuitive results visualization with targeted data plots, charts, Venn diagrams, heatmaps and clustering that provide answers aligned with experimental objectives
- Methylation site identification
- CpG island identification
- Differentially methylated site lists
- Presentation and discussion of results with project lead

Recognized by Expert Review of Molecular Diagnostics, as a best practice in bioinformatics, OnRamp Bio streamlines data analyses with a leading scientific team, interactive software and dedicated cloud systems.

Focus on what to do with your results, as opposed to how to get them.

Turnaround Time
- Setup & Data Transfer: 1-2 days
- Analysis: 1-5 days (depends on quantity of samples)

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Big Data Software Architecture Human Mouse Rat Private Cloud Servers Data Management Data Provenance Analysis Provenance Next Generation Sequencing Bioinformatics pipelines Trimming Filtering Data Visualization Data Exploration Biology Drug Discovery Genomics Show 17 more tags Show less

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Bioinformatics

Price on request

Comprehensive bioinformatics analysis
- Gene expression profiling, Gene Ontology and pathway analysis for transcriptomics
- Variant calling and interpretation for whole genome, exome or targeted studies
- Protein binding and methylation sites for epigenetics studies
- Virus and bacterial diversity and abundance and... Show more »

Comprehensive bioinformatics analysis
- Gene expression profiling, Gene Ontology and pathway analysis for transcriptomics
- Variant calling and interpretation for whole genome, exome or targeted studies
- Protein binding and methylation sites for epigenetics studies
- Virus and bacterial diversity and abundance and functional classification for microbiome studies
- Custom pipelines and analyses

Deliverables
- Intuitive results visualization
- Presentation and discussion of results with project lead

Recognized by Expert Review of Molecular Diagnostics as a best practice in bioinformatics, OnRamp Bio streamlines data analyses with a leading scientific team, interactive software and dedicated cloud systems.

Focus on what to do with your results, as opposed to how to get them.

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Human Mouse Rat Next Generation Sequencing Bioinformatics pipelines Microarray NGS NGS Panels Biology Drug Discovery Genomics Show 11 more tags Show less

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Bioinformatics Experimental Design

Price on request
  • Design your experiment to efficiently achieve your objectives
  • Avoid frequent technical and scientific pitfalls with improperly designed genomic experiments
  • Select the most cost-effective and appropriate technologies to generate optimal data (next-generation sequencing, microarrays, panels, mass spec, etc)
  • Start your... Show more »
  • Design your experiment to efficiently achieve your objectives
  • Avoid frequent technical and scientific pitfalls with improperly designed genomic experiments
  • Select the most cost-effective and appropriate technologies to generate optimal data (next-generation sequencing, microarrays, panels, mass spec, etc)
  • Start your project with full confidence after feedback and review from our team of experts

Deliverables
- Consultation on proposed experimental design (phone/webex)
- Guidance on process and selection of sequence service providers
- Guidance on required data analysis and pipelines
- Presentation of recommendations (PDF Report)

Turnaround Time
- Initial meeting scheduled within 1-2 days
- Subsequent project completion: 1-2 days (depends on scope of project)

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Assay Development

Price on request
  • Design your experiment to efficiently achieve your objectives
  • Avoid frequent technical and scientific pitfalls with improperly designed genomic experiments
  • Select the most cost-effective and appropriate technologies to generate optimal data (next-generation sequencing, microarrays, panels, mass spec, etc)
  • Start your... Show more »
  • Design your experiment to efficiently achieve your objectives
  • Avoid frequent technical and scientific pitfalls with improperly designed genomic experiments
  • Select the most cost-effective and appropriate technologies to generate optimal data (next-generation sequencing, microarrays, panels, mass spec, etc)
  • Start your project with full confidence after feedback and review from our team of experts

Deliverables
- Consultation on proposed experimental design (phone/webex)
- Guidance on process and selection of sequence service providers
- Guidance on required data analysis and pipelines
- Presentation of recommendations (PDF Report)

Turnaround Time
- Initial meeting scheduled within 1-2 days
- Subsequent project completion: 1-2 days (depends on scope of project)

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Next Generation Sequencing Bioinformatics pipelines Microarray Proteomics Data Visualization Data Validation Data Exploration RNA DNA Biology Drug Discovery Genomics Show 12 more tags Show less

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Bioinformatics Consulting

Price on request

Custom bioinformatics analyses
- Advanced bioinformatics consulting and custom analyses performed by our team of highly-trained specialists
- Experienced with a wide range of pipelines and data types
- Industry standard tools published in peer-reviewed journals
- Assistance with experiment design. Start your project off... Show more »

Custom bioinformatics analyses
- Advanced bioinformatics consulting and custom analyses performed by our team of highly-trained specialists
- Experienced with a wide range of pipelines and data types
- Industry standard tools published in peer-reviewed journals
- Assistance with experiment design. Start your project off on the right foot by designing an experiment that will deliver the answers you need.

Deliverables
- As requested

Turnaround Time
- Case dependent

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Big Data Software Architecture Human Mouse Rat Private Cloud Servers Data Management Data Provenance Analysis Provenance Next Generation Sequencing Bioinformatics pipelines Microarray ChIP-Seq RNA-Seq NGS NGS Panels Biomarker analysis Differential Expression mRNA-seq miRNA-seq High Performance Computing Data Visualization Data Validation Data Exploration DNA-Seq Whole Exome Sequencing Whole Genome Biology Drug Discovery Genomics Filtered Gene List Drug-Gene Regulation Show 31 more tags Show less

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RNA-Seq Data Analysis

Starting at $60.00 per sample

RNA-seq Data Analysis & Data Storage
- Rapid analysis and interpretation of raw RNA-seq (transcriptome) sequence files (FASTQ) to gain insights into target genes, and overall expression levels
- Comprehensive analysis of upregulation and downregulation of genes
- Comparisons of differentially expressed genes across samples,... Show more »

RNA-seq Data Analysis & Data Storage
- Rapid analysis and interpretation of raw RNA-seq (transcriptome) sequence files (FASTQ) to gain insights into target genes, and overall expression levels
- Comprehensive analysis of upregulation and downregulation of genes
- Comparisons of differentially expressed genes across samples, time series, or any other condition, or criteria
- Differentially expressed genes across samples, time series, treatments or any other condition or criteria
- Sort, filter and identify key patterns and pathways in highly expressed gene signatures
- Industry standard tools published in peer-reviewed journals
- Collaborate and share results across any extended research team

Deliverables
- Intuitive results visualization with targeted data plots, charts, Venn diagrams, heatmaps and clustering that provides answers aligned with experimental objectives
- Differentially expressed gene lists
- Gene expression level lists, charts, tables, CSV files
- Pathway Analysis
- Gene Ontology
- Disease and miRNA regulators
- 30min presentation and discussion of results with OnRamp project lead

Recognized by Expert Review of Molecular Diagnostics, as a best practice in bioinformatics, OnRamp Bio streamlines data analyses with leading scientific team, interactive software and dedicated cloud systems.

Focus on what to do with your results, as opposed to how to get them.

Turnaround Time
- Setup & Data Transfer: 1-2 days
- Analysis: 1-2 days (depends on quantity of samples)

Show less
Big Data Software Architecture Human Mouse Rat Private Cloud Servers Data Management Data Provenance Analysis Provenance Next Generation Sequencing Bioinformatics pipelines Gene expression profiling RNA-Seq NGS NGS Panels Differential Expression Trimming Filtering mRNA-seq miRNA-seq Data Visualization Data Exploration RNA sequencing Biology Drug Discovery Genomics Gene List Filtered Gene List Drug-Gene Regulation Show 28 more tags Show less

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Single Cell Sequencing Data Analysis

Price on request
Request a quote for more information about this service.

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Protein-DNA Interaction Analysis

Starting at $60.00 per sample

Comprehensive ChIP Analysis
- Rapid analysis of raw chromatin immunoprecipitation sequencing ChIP-seq files (FASTQ) to identify regions of protein interaction with DNA
- Annotate and analyze motifs on the predicted binding regions
- Differential analysis of binding between conditions
- Industry standard tools published in... Show more »

Comprehensive ChIP Analysis
- Rapid analysis of raw chromatin immunoprecipitation sequencing ChIP-seq files (FASTQ) to identify regions of protein interaction with DNA
- Annotate and analyze motifs on the predicted binding regions
- Differential analysis of binding between conditions
- Industry standard tools published in peer-reviewed journals
- Collaborate and share results across any extended research team

Deliverables
- Intuitive results visualization with targeted data plots, charts, Venn diagrams, heatmaps and clustering that provide answers aligned with experimental objectives
- ChIP QC reports
- Peaks files
- Annotations and motif analysis
- Differentially bound regions / genes
- 30min presentation and discussion of results with project lead

Recognized by Expert Review of Molecular Diagnostics, as a best practice in bioinformatics, OnRamp Bio streamlines data analyses with a leading scientific team, interactive software and dedicated cloud systems.

Focus on what to do with your results, as opposed to how to get them.

Turnaround Time
- Setup & Data Transfer: 1-2 days
- Analysis: 1-5 days (depends on quantity of samples)

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Big Data Software Architecture Human Mouse Rat Private Cloud Servers Data Management Data Provenance Analysis Provenance Next Generation Sequencing Bioinformatics pipelines ChIP-Seq Trimming Filtering Data Visualization Data Exploration Biology Drug Discovery Genomics Gene List Filtered Gene List Show 20 more tags Show less

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Single Cell Gene Expression Analysis

Price on request

Comprehensive analysis of single cell gene expression
- Rapid analysis of raw RNA-seq (transcriptome) sequence files (FASTQ) to gain insights into target genes, and overall expression levels
- Comprehensive analysis of upregulated and downregulated genes
- Differentially expressed genes across samples, time series,... Show more »

Comprehensive analysis of single cell gene expression
- Rapid analysis of raw RNA-seq (transcriptome) sequence files (FASTQ) to gain insights into target genes, and overall expression levels
- Comprehensive analysis of upregulated and downregulated genes
- Differentially expressed genes across samples, time series, treatments or any other condition, or criteria
- de novo identification of unique cell sub-populations
- Sort, filter and identify key patterns and pathways in highly expressed gene signatures
- Industry standard tools published in peer-reviewed journals
- Collaborate and share results across any extended research team

Deliverables
- Intuitive results visualization with targeted data plots, charts, Venn diagrams, heatmaps and clustering that provide answers aligned with experimental objectives
- Differentially expressed gene lists
- Gene expression level and cell cluster lists, charts, tables, CSV files
- Presentation and discussion of results with project lead

Turnaround Time
- Setup & Data Transfer: 1-2 days
- Analysis: 1-2 days (depends on quantity of samples)

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Whole Exome Data Analysis

Price on request

Advanced bioinformatics analysis and visual analytics for Whole Exome Sequencing (DNA-seq)
- Rapid analysis of raw DNA-seq files (FASTQ) to identify single nucleotide variants (SNVs)
- Analysis available for single genome, trios, cohorts, or tumor-normal pairs
- Industry standard tools published in peer-reviewed... Show more »

Advanced bioinformatics analysis and visual analytics for Whole Exome Sequencing (DNA-seq)
- Rapid analysis of raw DNA-seq files (FASTQ) to identify single nucleotide variants (SNVs)
- Analysis available for single genome, trios, cohorts, or tumor-normal pairs
- Industry standard tools published in peer-reviewed journals
- Collaborate and share results across any extended research team

Deliverables
- Intuitive results report and data visualization with targeted charts, and Venn diagrams, that provide answers aligned with experimental objectives
- Annotated variant lists and interpretation
- Presentation and discussion of results with project lead

Recognized by Expert Review of Molecular Diagnostics, as a best practice in bioinformatics, OnRamp Bio streamlines data analyses with a leading scientific team, interactive software and dedicated cloud systems.

Focus on what to do with your results, as opposed to how to get them.

Turnaround Time
- Setup & Data Transfer: 1-2 days
- Analysis: 1-7 days (depends on quantity of samples)

Show less
Big Data Software Architecture Human Mouse Rat Humanized Mouse Genome Analysis ToolKit GATK Private Cloud Servers Data Management Data Provenance Analysis Provenance Oncology Rare Disease Next Generation Sequencing Bioinformatics pipelines Exome sequencing Trimming High Performance Computing Data Visualization Data Validation Data Exploration Variant Calling Tumor-Normal Pedigree DNA-Seq Whole Exome Sequencing Biology Genomics Rare Disease Variants Show 29 more tags Show less

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Metagenomics Data Analysis

Price on request

Metagenomics Data Analysis & Data Storage
- Rapid analysis of 16s or shotgun metagenomics data files
- Gain insight into communities of microorganisms found in environmental samples
- Industry standard tools published in peer-reviewed journals
- Collaborate and share results across any extended research... Show more »

Metagenomics Data Analysis & Data Storage
- Rapid analysis of 16s or shotgun metagenomics data files
- Gain insight into communities of microorganisms found in environmental samples
- Industry standard tools published in peer-reviewed journals
- Collaborate and share results across any extended research team

Deliverables
- Lists and relative abundances of microorganisms found in environmental samples
- Functional pathway identification
- Interactive results visualization and exploration
- Presentation and discussion of results with project lead

Recognized by Expert Review of Molecular Diagnostics, as a best practice in bioinformatics, OnRamp Bio streamlines data analyses with a leading scientific team, interactive software and dedicated cloud systems.

Focus on what to do with your results, as opposed to how to get them.

Turnaround Time
- Setup & Data Transfer: 1-2 days
- Analysis: 1-5 days (depends on quantity of samples)

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Big Data Software Architecture Private Cloud Servers Data Management Data Provenance Analysis Provenance Shotgun DNA Sequencing Bioinformatics pipelines High Performance Computing Data Visualization Data Exploration Metagenome Biology Genomics Show 13 more tags Show less

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Bioinformatics Data Analysis

Price on request
Request a quote for more information about this service.

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NGS Data Analysis

Next generation sequencing data analysis
Price on request

Comprehensive bioinformatics analysis
- Gene expression profiling, Gene Ontology and pathway analysis for transcriptomics
- Variant calling and interpretation for whole genome, exome or targeted studies
- Protein binding and methylation sites for epigenetics studies
- Virus and bacterial diversity and abundance and... Show more »

Comprehensive bioinformatics analysis
- Gene expression profiling, Gene Ontology and pathway analysis for transcriptomics
- Variant calling and interpretation for whole genome, exome or targeted studies
- Protein binding and methylation sites for epigenetics studies
- Virus and bacterial diversity and abundance and functional classification for microbiome studies
- Custom pipelines and analyses

Deliverables
- Intuitive results visualization
- Presentation and discussion of results with project lead

Recognized by Expert Review of Molecular Diagnostics as a best practice in bioinformatics, OnRamp Bio streamlines data analyses with a leading scientific team, interactive software and dedicated cloud systems.

Focus on what to do with your results, as opposed to how to get them.

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Human Mouse Rat Next Generation Sequencing Bioinformatics pipelines Biology Drug Discovery Genomics Show 8 more tags Show less

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Biostatistical Analysis

Price on request
Request a quote for more information about this service.

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Sequencing Data Analysis and Management

Price on request

Comprehensive bioinformatics analysis
- Gene expression profiling, Gene Ontology and pathway analysis for transcriptomics
- Variant calling and interpretation for whole genome, exome or targeted studies
- Protein binding and methylation sites for epigenetics studies
- Virus and bacterial diversity and abundance and... Show more »

Comprehensive bioinformatics analysis
- Gene expression profiling, Gene Ontology and pathway analysis for transcriptomics
- Variant calling and interpretation for whole genome, exome or targeted studies
- Protein binding and methylation sites for epigenetics studies
- Virus and bacterial diversity and abundance and functional classification for microbiome studies
- Custom pipelines and analyses

Deliverables
- Intuitive results visualization
- Presentation and discussion of results with project lead

Recognized by Expert Review of Molecular Diagnostics as a best practice in bioinformatics, OnRamp Bio streamlines data analyses with a leading scientific team, interactive software and dedicated cloud systems.

Focus on what to do with your results, as opposed to how to get them.

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Human Mouse Rat Next Generation Sequencing Bioinformatics pipelines Microarray Biology Drug Discovery Genomics Show 9 more tags Show less

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Biostatistics & Bioinformatics

Price on request
Request a quote for more information about this service.

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Gene Pathway Analysis

Price on request
Request a quote for more information about this service.

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DNA Sequencing Data Analysis

Price on request
Request a quote for more information about this service.

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Metatranscriptomics Data Analysis

Price on request

Metranscriptomics Data Analysis & Data Storage
- Gain insight into genes expressed in environmental samples
- Industry standard tools published in peer-reviewed journals
- Collaborate and share results across any extended research team

Deliverables
- Interactive results visualization and exploration
- Presentation... Show more »

Metranscriptomics Data Analysis & Data Storage
- Gain insight into genes expressed in environmental samples
- Industry standard tools published in peer-reviewed journals
- Collaborate and share results across any extended research team

Deliverables
- Interactive results visualization and exploration
- Presentation and discussion of results with project lead

Recognized by Expert Review of Molecular Diagnostics, as a best practice in bioinformatics, OnRamp Bio streamlines data analyses with a leading scientific team, interactive software and dedicated cloud systems.

Focus on what to do with your results, as opposed to how to get them.

Turnaround Time
- Setup & Data Transfer: 1-2 days
- Analysis: 1-5 days (depends on quantity of samples)

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Big Data Software Architecture Private Cloud Servers Data Management Data Provenance Analysis Provenance Bioinformatics pipelines Data Visualization Data Exploration Metatranscriptome Biology Genomics Show 11 more tags Show less

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miRNA-Sequencing Data Analysis

Price on request
Request a quote for more information about this service.

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Microarray Data Analysis

Price on request

Comprehensive microarray bioinformatics analysis
- Gene expression profiling, Gene Ontology and pathway analysis for transcriptomics
- Variant calling and interpretation for whole genome, exome or targeted studies
- Protein binding and methylation sites for epigenetics studies
- Custom pipelines and... Show more »

Comprehensive microarray bioinformatics analysis
- Gene expression profiling, Gene Ontology and pathway analysis for transcriptomics
- Variant calling and interpretation for whole genome, exome or targeted studies
- Protein binding and methylation sites for epigenetics studies
- Custom pipelines and analyses

Deliverables
- Intuitive results visualization
- Presentation and discussion of results with project lead

Recognized by Expert Review of Molecular Diagnostics as a best practice in bioinformatics, OnRamp Bio streamlines data analyses with a leading scientific team, interactive software and dedicated cloud systems.

Focus on what to do with your results, as opposed to how to get them.

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Human Mouse Rat Microarray Biology Drug Discovery Genomics Show 7 more tags Show less

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Genomics Data Analysis

Price on request
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Data Management

Price on request

Solve your data management and IT challenges
- With decades or experience in life sciences information technology and data management, our team of highly-trained specialists is available to deliver a cloud or on-premise storage and software solution that works for you.

Deliverables
- IT and data management solution that fits your needs

Solve your data management and IT challenges
- With decades or experience in life sciences information technology and data management, our team of highly-trained specialists is available to deliver a cloud or on-premise storage and software solution that works for you.

Deliverables
- IT and data management solution that fits your needs

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Big Data Software Architecture Private Cloud Servers Data Management Data Provenance Analysis Provenance High Performance Computing Data Visualization Data Validation Data Exploration Biology Drug Discovery Genomics Show 12 more tags Show less

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Proteomics Data Analysis

Price on request
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Transcriptomics Data Analysis

Price on request
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Whole Exome Sequencing Data Analysis

Price on request
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Small RNA Sequencing Data Analysis

Price on request
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Biochemistry & Molecular Biology

Price on request
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Clinical Research

Price on request
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CRISPR Bioinformatics

Price on request
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Metagenomics

Price on request
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Nucleic Acid Analysis

Price on request
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Clinical Laboratory Services

Price on request
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Computational Modeling

Price on request
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Epigenetic Studies

Price on request
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Genotyping and Gene Expression Assays

Price on request
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Biomolecular Interaction Analysis

Price on request
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Genetic Marker Screening Services

Price on request
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Biology

Price on request
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Protein Sequencing

Price on request
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Nucleic Acid Data Analysis

Price on request
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Project Management

Price on request
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Data Services

Price on request
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Genetic Engineering

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DNA Services

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PCR

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RNA Services

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Clinical Molecular Diagnostics

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DNA Sequencing

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Next Generation Sequencing (NGS)

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Statistical Analysis

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Data Analysis

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Proteomics

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Jeremy Davis-Turak

VP of BioInformatics
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Jean Lozach

Chief Technology Officer
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Scott McIntee

VP Sales
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Roshni Patel

Staff BioInformatician
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Angel Stanz

VP of Software Engineering and User Experience
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Timothy Wesselman

President & CEO
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20171028-Rosalind-Flyer.pdf

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OnRamp Bio SE Brochure v3.pdf

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OnRamp Bio Service Sheet (SE).pdf

  • Positive review for ChIP-Seq Data Analysis:

    April 2018

    "The OnRamp Bioinformatics team was a pleasure to work with. They did an extremely thorough analysis of the ChIP-Seq data I provided. I will definitely return to them again for any future bioinformatics analysis as well as strongly recommend their services to anyone. They were very receptive and thorough with answering all of my questions and also did not waste any time getting the project completed. Highly recommended!"

  • Positive review for MicroRNA (miRNA) Expression Profiling:

    June 2017

    "It was pleasure working with OnRamp Bioinformatics. We were provided with good quality microRNA profiling data for an affordable price. OnRamp Bioinformatics provided one-on-one support to explain the specifics of our data. Thank you so much for your work! We look forward to working with you in the future!"

  • Positive review for RNA-Seq Data Analysis:

    April 2017

    "I and my colleagues worked with OnRamp Bioinformatics for Gene Expression analysis. This service was great and very prompt and the cost was reasonable. We would definitely recommend this service."

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    Gary HardimanFebruary 2017

    "I've had the opportunity to work closely with the Onramp team for the last two years. Together we have completed hundreds of analyses. Their software solutions and team have been instrumental to advancing our research at MUSC. Jeremy and Roshni on the bioinformatics team are great. They've been responsive and insightful - and even seem like an extension of our team at times!"

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    Rob EdwardsFebruary 2017

    I highly recommend OnRamp for their Bioinformatics expertise. I have worked with them on several genomics and metagenomics projects and the team is professional, completes the work on deadline and budget, and generated results we hadn't expected.

    OnRamp will work with you every step of the way, from project inception, through interfacing with sequencing partners, through developing novel informatics solutions for your project.

    OnRamps bioinformatics platform has many unique attributes that make it appealing, but their data and analysis tracking is just amazing: provenance for all your analyses from the minute the sequences arrive.

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    David CarpentieriFebruary 2017

    OnRamp Bioinformatics offers a great window of opportunity for the future of personalized medicine. Tim is an individual devoted to his work and he will do anything at his reach to help you achieve your goals. I highly recommend his team for anyone who has an interest in integrating molecular data into research and clinical practice.

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