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Kinghorn Centre for Clinical Genomics

Sydney New South Wales

The Garvan Institute’s Kinghorn Centre for Clinical Genomics (KCCG) is a centre of excellence for genomic research. We offer high quality, large-scale, low-cost whole genome sequencing on the Illumina HiSeq X™Ten platform together with our (optional) Precision FDA award-winning bioinformatics analysis.

Kinghorn Centre for Clinical Genomics has not listed any services.

Whole Genome Sequencing
Starting at $1,000.00 per sample

HISEQ X TEN WHOLE GENOME SEQUENCING

  • Clinically accredited laboratory (ISO 15189) and Precision FDA award-winning bioinformatics analysis
  • TruSeq Nano or PCR-Free library preparation
  • Flexible choice of 15x (TruSeq Nano) or 30x coverage for human DNA (as defined by Illumina^)
  • Flexible choice of ≥50Gb (TruSeq Nano) or... Show more »

HISEQ X TEN WHOLE GENOME SEQUENCING

  • Clinically accredited laboratory (ISO 15189) and Precision FDA award-winning bioinformatics analysis
  • TruSeq Nano or PCR-Free library preparation
  • Flexible choice of 15x (TruSeq Nano) or 30x coverage for human DNA (as defined by Illumina^)
  • Flexible choice of ≥50Gb (TruSeq Nano) or ≥100 Gb raw data
  • Guaranteed ≥75% bases above Q30
  • 150bp paired-end read length
  • Includes DNA and library QC
  • Delivery of FASTQ data via online portal DNAnexus or hard drive (additional cost) with clinical-grade security and privacy
  • Turn around time - 6 weeks from sample receipt to data delivery

Add-on services:
- Precision FDA award-winning bioinformatics analysis using gold-standard alignment software GATK and variant calling software BWA to generate best practice BAM and VCF files
- Hard drive delivery

^ in line with Illumina’s ‘Sequencing Coverage Calculation Methods for Human WGS’ documentation


The HiSeq X™ Ten system is exclusively for whole genome sequencing. Sequencing services are presently available for research purposes only. Services are not available to members of the public or for personal sequencing. Researchers are responsible for ensuring that all relevant ethics approvals have been obtained prior to providing samples.


Please refer to the Resources section for additional submission information.


Instrumentation: HiSeq X Ten

« Show less
Human
Plant
Illumina HiSeq X Ten
Illumina TruSeq Nano DNA library prep kit
Mouse
animal
non-human
Genomics
Kapa Hyper PCR-Free sample prep kit
10X Genomics Chromium™ NGS
Starting at $1,450.00 per sample

The Chromium Genome Solution in combination with the HiSeq X Ten unlocks the analysis of large and complex rearrangements of the genome.

  • 30x coverage for human DNA
  • ≥100 Gb raw data
  • ≥75% bases above Q30
  • 150bp paired-end read length
  • Includes DNA and library QC
  • Delivery of FASTQ data via online portal DNAnexus or... Show more »

The Chromium Genome Solution in combination with the HiSeq X Ten unlocks the analysis of large and complex rearrangements of the genome.

  • 30x coverage for human DNA
  • ≥100 Gb raw data
  • ≥75% bases above Q30
  • 150bp paired-end read length
  • Includes DNA and library QC
  • Delivery of FASTQ data via online portal DNAnexus or hard drive (additional cost) with clinical-grade security and privacy
  • Turn around time - upon request

Add-on services:
- Chromium Genome Solution library preparation
- Precision FDA award-winning bioinformatics analysis using gold-standard alignment software GATK and variant calling software BWA to generate best practice BAM and VCF files
- Hard drive delivery


Please refer to the Resources section for additional submission information.


Instrumentation: 10x Chromium System

« Show less
Human
non-human
Chromium Genomics Solution
Bioinformatics
Starting at $100.00 per sample

Precision FDA award-winning bioinformatics analysis using gold-standard alignment software GATK and variant calling software BWA to generate best practice BAM and VCF files

Garvan’s KCCG team achieved the highest overall precision in detecting SNPs in the unknown genome, in an international competition designed to test the... Show more »

Precision FDA award-winning bioinformatics analysis using gold-standard alignment software GATK and variant calling software BWA to generate best practice BAM and VCF files

Garvan’s KCCG team achieved the highest overall precision in detecting SNPs in the unknown genome, in an international competition designed to test the performance of genome informatics pipelines worldwide. The team’s precision level of over 99.98% earned them the “SNP Precision” award. In addition, the team gained several commendations for both sensitivity and precision in detecting insertions and deletions.

« Show less
Burrows-Wheeler Aligner
Genome Analysis ToolKit v3
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2017-09-08 03:33:42 +1200

Net Promoter Score of 10 received for Whole Genome Sequencing.

Additional Ratings: satisfaction with deliverable: 10, satisfaction with timeliness: 10.
December 2, 2016

Positive review received for Whole Genome Sequencing:

"The service is awesome. We had several delays and the facility is very accommodating. The service was also very quick and data quality is good. Overall we had a very good experience with this facility. Thank you."

November 23, 2016

Positive review received for Whole Genome Sequencing:

"We were very happy with the service offered by Kinghorn"

2016-10-21 12:21:57 +1300

Net Promoter Score of 10 received for Whole Genome Sequencing.

Additional Ratings: satisfaction with timeliness: 10.
July 8, 2016

Negative review received for Whole Genome Sequencing:

"it will be hard to make the decision. the major difficulty is the headache sample shipping process, with so many legal/administration approval/lawyer involved/shipping restriction although Kinghorn Center provided excellent actual sequencing work. I would strongly suggest to simplify the sample shipping system, with a one-hit for all, to benefit potential customers around the world."

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