1345075202000

Genomics Core Facility

ic No Reviews Yet
ic No Completed Orders
Charlottesville, Virginia, US

About Genomics Core Facility

The GCF provides second generation genome sequencing service to all members of the scientific community. Using the 454 Life Sciences/Roche Genome Sequencer FLX, we facilitate data collection and analysis.

Our Services (12)


ic

Roche 454 Sequencing

Roche 454 next generation sequencing
Price on request

Long single reads
- Approximately 400 nt of HQ pass for the vast majority of shotgun libraries
- Yields data for de novo assemblies of virtually any genomic―nuclear/organellar―samples
- Enables analysis of transcriptomes with fine resolution

3-, 8- or 20kb paired end libraries
- Provide positional information for... Show more »

Long single reads
- Approximately 400 nt of HQ pass for the vast majority of shotgun libraries
- Yields data for de novo assemblies of virtually any genomic―nuclear/organellar―samples
- Enables analysis of transcriptomes with fine resolution

3-, 8- or 20kb paired end libraries
- Provide positional information for scaffolding genomes and ordering contigs/existing assemblies
- Useful for complex genomes that are heavy with repeat motifs or that undergo frequent rearrangement

Sequence targeted amplicons
- Examine variation at multiple levels or organization via standard PCR
- Primers contain 454 process-specific sequence flanking the gene-specific regions
- Analyze hundreds of samples in a single run

Multiplexed analysis
- Employ a combination of small multiplex identifier (MID) nucleotide sequence tags and physical separation during sequencing to maximize unique samples and retain input identity

NimbleGen sequence capture arrays

Supported software suite for data analysis
- Each customer receives the most current GS software package
- GS Assembler
- GS Reference Mapper
- GS Amplicon Variant Analyzer
- Intuitive graphic or command line interfaces simplify the analysis pipeline

Show less

ic

Roche 454 NGS Data Analysis

Roche 454 next generation sequencing data analysis
Price on request

Supported software suite for data analysis
- Each customer receives the most current GS software package
- GS Assembler
- GS Reference Mapper
- GS Amplicon Variant Analyzer
- Intuitive graphic or command line interfaces simplify the analysis pipeline

Supported software suite for data analysis
- Each customer receives the most current GS software package
- GS Assembler
- GS Reference Mapper
- GS Amplicon Variant Analyzer
- Intuitive graphic or command line interfaces simplify the analysis pipeline

Show less

ic

Amplicon Sequencing

Price on request

Sequence targeted amplicons
- Examine variation at multiple levels or organization via standard PCR
- Primers contain 454 process-specific sequence flanking the gene-specific regions
- Analyze hundreds of samples in a single run

Sequence targeted amplicons
- Examine variation at multiple levels or organization via standard PCR
- Primers contain 454 process-specific sequence flanking the gene-specific regions
- Analyze hundreds of samples in a single run

Show less

ic

Nucleic Acid Analysis

Price on request
Request a quote for more information about this service.

ic

Sequencing Data Analysis and Management

Price on request
Request a quote for more information about this service.

ic

DNA Sequencing

Price on request
Request a quote for more information about this service.

ic

DNA Services

Price on request
Request a quote for more information about this service.

ic

Biochemistry & Molecular Biology

Price on request
Request a quote for more information about this service.

ic

Nucleic Acid Data Analysis

Price on request
Request a quote for more information about this service.

ic

Next Generation Sequencing (NGS)

Price on request
Request a quote for more information about this service.

ic

Biology

Price on request
Request a quote for more information about this service.

ic

Nucleic Acid Services

Price on request
Request a quote for more information about this service.

Not finding what you're looking for?

Get info on this provider's capabilities without requesting a quote.
Missing Avatar

Anhthu Nguyen

Operations Manager

Genomics Core Facility has not received any reviews.

Genomics Core Facility has not received any endorsements.