1352588821707 5ab53dce542c41b945b3554179edc5d9

Deep Sequencing and Microarray Core

ic 8.6/10 Overall Rating 100% Positive
ic 15 Orders Completed
Baltimore, Maryland, US

About Deep Sequencing and Microarray Core

Our aim is to provide cost-effective and time-efficient access to cutting-edge genomic technologies and expert assistance with experimental design and data analysis.

Certifications & Qualifications

Agilent Service Provider

Our Services (31)


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DNA Sequencing Data Analysis

Price on request
Request a quote for more information about this service.

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16S rRNA Sequencing

Price on request

We offer bacterial 16s V3+V4 region or V4 region sequencing services on Illumina MiSeq Platform (for 2X300bp or 2X150bp sequencing respectively).

We offer bacterial 16s V3+V4 region or V4 region sequencing services on Illumina MiSeq Platform (for 2X300bp or 2X150bp sequencing respectively).

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Affymetrix Microarray

Starting at $800.00 per sample

Affymetrix microarray service for all Affymetrix cartridge arrays including gene expression, SNP, promoter array, miRNA expression.

Affymetrix microarray service for all Affymetrix cartridge arrays including gene expression, SNP, promoter array, miRNA expression.

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Affymetrix

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Affymetrix RNA Microarray

Price on request

Clariom D and S arrays, PrimeView arrays, model organism Gene 1.0ST arrays, miRNA arrays

Clariom D and S arrays, PrimeView arrays, model organism Gene 1.0ST arrays, miRNA arrays

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Affymetrix

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Affymetrix microRNA (miRNA) Microarray

Price on request

Affymetrix miRNA v.4

Affymetrix miRNA v.4

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Affymetrix

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Agilent DNA Microarray

Price on request

We offer multiplatform microarray services including Affymetrix, Agilent, and Roche/Nimblegen.

Our instrumentation for microarray analysis include two Affymetrix GeneChip Systems with autoloaders (capable of autoscanning 48 GeneChips each), four fluidic stations, two Affymetrix hybridization ovens, four BioMicro MAUI... Show more »

We offer multiplatform microarray services including Affymetrix, Agilent, and Roche/Nimblegen.

Our instrumentation for microarray analysis include two Affymetrix GeneChip Systems with autoloaders (capable of autoscanning 48 GeneChips each), four fluidic stations, two Affymetrix hybridization ovens, four BioMicro MAUI Hybridization Stations for regular slide microarray hybridization, Axon GenePix Scanner, Agilent′s most advanced 2-Micro Scanner, Agilent hybridization oven and a Robbins Scientific 400 Oven fitted with a rotator for Agilent hybridization chambers.

We offer microarray services from all these companies on all their catalog arrays and custom arrays.

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Agilent

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Agilent RNA Microarray

Price on request

We offer multiplatform microarray services including Affymetrix, Agilent, and Roche/Nimblegen.

Our instrumentation for microarray analysis include two Affymetrix GeneChip Systems with autoloaders (capable of autoscanning 48 GeneChips each), four fluidic stations, two Affymetrix hybridization ovens, four BioMicro MAUI... Show more »

We offer multiplatform microarray services including Affymetrix, Agilent, and Roche/Nimblegen.

Our instrumentation for microarray analysis include two Affymetrix GeneChip Systems with autoloaders (capable of autoscanning 48 GeneChips each), four fluidic stations, two Affymetrix hybridization ovens, four BioMicro MAUI Hybridization Stations for regular slide microarray hybridization, Axon GenePix Scanner, Agilent′s most advanced 2-Micro Scanner, Agilent hybridization oven and a Robbins Scientific 400 Oven fitted with a rotator for Agilent hybridization chambers.

We offer microarray services from all these companies on all their catalog arrays and custom arrays.

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Agilent

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Agilent High Throughput (HT) Microarray

Price on request

We offer multiplatform microarray services including Affymetrix, Agilent, and Roche/Nimblegen.

Our instrumentation for microarray analysis include two Affymetrix GeneChip Systems with autoloaders (capable of autoscanning 48 GeneChips each), four fluidic stations, two Affymetrix hybridization ovens, four BioMicro MAUI... Show more »

We offer multiplatform microarray services including Affymetrix, Agilent, and Roche/Nimblegen.

Our instrumentation for microarray analysis include two Affymetrix GeneChip Systems with autoloaders (capable of autoscanning 48 GeneChips each), four fluidic stations, two Affymetrix hybridization ovens, four BioMicro MAUI Hybridization Stations for regular slide microarray hybridization, Axon GenePix Scanner, Agilent′s most advanced 2-Micro Scanner, Agilent hybridization oven and a Robbins Scientific 400 Oven fitted with a rotator for Agilent hybridization chambers.

We offer microarray services from all these companies on all their catalog arrays and custom arrays.

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Agilent

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Agilent microRNA (miRNA) Microarray

Price on request

We offer multiplatform microarray services including Affymetrix, Agilent, and Roche/Nimblegen.

Our instrumentation for microarray analysis include two Affymetrix GeneChip Systems with autoloaders (capable of autoscanning 48 GeneChips each), four fluidic stations, two Affymetrix hybridization ovens, four BioMicro MAUI... Show more »

We offer multiplatform microarray services including Affymetrix, Agilent, and Roche/Nimblegen.

Our instrumentation for microarray analysis include two Affymetrix GeneChip Systems with autoloaders (capable of autoscanning 48 GeneChips each), four fluidic stations, two Affymetrix hybridization ovens, four BioMicro MAUI Hybridization Stations for regular slide microarray hybridization, Axon GenePix Scanner, Agilent′s most advanced 2-Micro Scanner, Agilent hybridization oven and a Robbins Scientific 400 Oven fitted with a rotator for Agilent hybridization chambers.

We offer microarray services from all these companies on all their catalog arrays and custom arrays.

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Agilent

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Bioinformatics

Price on request

Data analysis: We offer statistical and bioinformatic data analysis on primary data and downstream functional analyses.

We support data from our and other, outside, platforms; and can help with publication and database submission.

We also provide commercial software at affordable rates for general use on our workstations... Show more »

Data analysis: We offer statistical and bioinformatic data analysis on primary data and downstream functional analyses.

We support data from our and other, outside, platforms; and can help with publication and database submission.

We also provide commercial software at affordable rates for general use on our workstations or your own machine, either by subscription or by the hour.

These software packages include Partek®, Spotfire®, and Ingenuity® Pathway Analysis, and CLC bio® Genomic Workbench and Genomic Server.

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Gene Copy Number Analysis

Price on request

We offer the Nanostring nCounter Analysis services for multiplexed gene expression, miRNA expression, and copy number variation analysis.

The nCounter Analysis System utilizes a novel digital technology that use single molecule imaging to direcly counts the molecules without relying on enzymatic amplification.

It requires... Show more »

We offer the Nanostring nCounter Analysis services for multiplexed gene expression, miRNA expression, and copy number variation analysis.

The nCounter Analysis System utilizes a novel digital technology that use single molecule imaging to direcly counts the molecules without relying on enzymatic amplification.

It requires a small amount of samples and offers high level of precision and sensitivity.

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Custom Microarrays

Price on request

We offer multiplatform microarray services including Affymetrix, Agilent, and Roche/Nimblegen.

Our instrumentation for microarray analysis include two Affymetrix GeneChip Systems with autoloaders (capable of autoscanning 48 GeneChips each), four fluidic stations, two Affymetrix hybridization ovens, four BioMicro MAUI... Show more »

We offer multiplatform microarray services including Affymetrix, Agilent, and Roche/Nimblegen.

Our instrumentation for microarray analysis include two Affymetrix GeneChip Systems with autoloaders (capable of autoscanning 48 GeneChips each), four fluidic stations, two Affymetrix hybridization ovens, four BioMicro MAUI Hybridization Stations for regular slide microarray hybridization, Axon GenePix Scanner, Agilent′s most advanced 2-Micro Scanner, Agilent hybridization oven and a Robbins Scientific 400 Oven fitted with a rotator for Agilent hybridization chambers.

We offer microarray services from all these companies on all their catalog arrays and custom arrays.

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Agilent Affymetrix

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DNA Fragmentation Assays

Price on request

DNA, Chromotin, and RNA shearing: The core offers sample shearing services using either Covaris E210 instrument or Hydroshear instrument.

The Covaris instrument uses ultrasonic wave with defined wavelength and Adaptive Focused Acoustics (AFA) technology to efficiently shear DNA, chromatin, or RNA to size distributions less... Show more »

DNA, Chromotin, and RNA shearing: The core offers sample shearing services using either Covaris E210 instrument or Hydroshear instrument.

The Covaris instrument uses ultrasonic wave with defined wavelength and Adaptive Focused Acoustics (AFA) technology to efficiently shear DNA, chromatin, or RNA to size distributions less than 1.5 kb. Covaris is often used for library construction for short read sequencing.

The hydroshear is excellent for shearing DNA to a narrow size distribution with peak size larger than 2 kb.

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Illumina Sequencing

Price on request

We offer library constructions, for Illumina HiSeq and MiSeq NextGen sequencing platform; and for various applications: mRNA-seq, ChIP-seq, Single Read, Paired-End Read, Mate-pair, Targeted Resequencing using Agilent Sure-Select Technology,Microbiome 16S rRNA sequencing, and barcode multiplexing. We also offer complete service... Show more »

We offer library constructions, for Illumina HiSeq and MiSeq NextGen sequencing platform; and for various applications: mRNA-seq, ChIP-seq, Single Read, Paired-End Read, Mate-pair, Targeted Resequencing using Agilent Sure-Select Technology,Microbiome 16S rRNA sequencing, and barcode multiplexing. We also offer complete service from library construction, through sequencing, and data analysis.

Illumina HiSeq 2000 sequencing:
We offer library preparation, sequencing, and data analysis for Illumin HiSeq 2000 sequencing. Illumina HiSeq 2000 offers Deep sequencing with yield of about 200 million reads per lane. It is excellent for whole genome sequencing, RNA-seq, ChIP-seq and targeted sequencing. We prepare RNA-seq, DNA-seq, ChIP-seq, mate-pair library, and whole exome libraries with barcodeing. We offer paired-end and single read sequencing at various read length such as 36, 50, 75, and 100 cycles. For data analysis, we use both freewares such as bowtie, tophat, and cufflink, samtools etc and commercial softwares including CLCBio Genomic Workbench/Server and Partek Genomic Suites.

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Illumina

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Illumina NGS Library Preparation

Price on request

we offer library constructions, for every major commercial NextGen sequencing platform: Illumina HiSeq, Applied Biosystem SOLiD, and Roche 454.

we offer library constructions, for every major commercial NextGen sequencing platform: Illumina HiSeq, Applied Biosystem SOLiD, and Roche 454.

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Microarray Data Analysis

Price on request

Data analysis: We offer statistical and bioinformatic data analysis on primary data and downstream functional analyses.

We support data from our and other, outside, platforms; and can help with publication and database submission.

We also provide commercial software at affordable rates for general use on our workstations... Show more »

Data analysis: We offer statistical and bioinformatic data analysis on primary data and downstream functional analyses.

We support data from our and other, outside, platforms; and can help with publication and database submission.

We also provide commercial software at affordable rates for general use on our workstations or your own machine, either by subscription or by the hour.

These software packages include Partek®, Spotfire®, and Ingenuity® Pathway Analysis, and CLC bio® Genomic Workbench and Genomic Server.

Show less

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NGS Data Analysis

Next generation sequencing data analysis
Price on request

Data analysis: We offer statistical and bioinformatic data analysis on primary data and downstream functional analyses.

We support data from our and other, outside, platforms; and can help with publication and database submission.

We also provide commercial software at affordable rates for general use on our workstations... Show more »

Data analysis: We offer statistical and bioinformatic data analysis on primary data and downstream functional analyses.

We support data from our and other, outside, platforms; and can help with publication and database submission.

We also provide commercial software at affordable rates for general use on our workstations or your own machine, either by subscription or by the hour.

These software packages include Partek®, Spotfire®, and Ingenuity® Pathway Analysis, and CLC bio® Genomic Workbench and Genomic Server.

Show less

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NanoString nCounter Analysis

Price on request

We offer the Nanostring nCounter Analysis services for multiplexed gene expression, miRNA expression, and copy number variation analysis.

The nCounter Analysis System utilizes a novel digital technology that use single molecule imaging to direcly counts the molecules without relying on enzymatic amplification.
It requires a... Show more »

We offer the Nanostring nCounter Analysis services for multiplexed gene expression, miRNA expression, and copy number variation analysis.

The nCounter Analysis System utilizes a novel digital technology that use single molecule imaging to direcly counts the molecules without relying on enzymatic amplification.
It requires a small amount of samples and offers high level of precision and sensitivity.

Show less

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SMRT Sequencing

Single Molecule Real-Time Sequencing
Price on request

Third Gen Sequencing: We offer library preparation, sequencing, and data analysis on PacBio RS Single Molecule Real-Time (SMRT) sequencing platform.

Such services includes short circular consensus sequencing for high accuracy to validating SNPs identified using other technologies, long reads sequencing for identifying... Show more »

Third Gen Sequencing: We offer library preparation, sequencing, and data analysis on PacBio RS Single Molecule Real-Time (SMRT) sequencing platform.

Such services includes short circular consensus sequencing for high accuracy to validating SNPs identified using other technologies, long reads sequencing for identifying potential new transcript isoforms, fusion genes, and chromosomal structure variations, and for helping sequence mapping with short reads especially for sequencing through regions with repetitive sequences.

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PacBio RS II

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RNA Microarray Platforms

Price on request
Request a quote for more information about this service.

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Sequencing Data Analysis and Management

Price on request
Request a quote for more information about this service.

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DNA Sequencing

Price on request
Request a quote for more information about this service.

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MicroRNA (miRNA) Microarray

Price on request
Request a quote for more information about this service.

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RNA Microarray

Price on request
Request a quote for more information about this service.

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Biostatistics & Bioinformatics

Price on request
Request a quote for more information about this service.

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RNA Sequencing

Price on request
Request a quote for more information about this service.

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Nucleic Acid Data Analysis

Price on request
Request a quote for more information about this service.

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DNA Services

Price on request
Request a quote for more information about this service.

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DNA Microarrays

Price on request
Request a quote for more information about this service.

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Next Generation Sequencing (NGS)

Price on request
Request a quote for more information about this service.

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DNA Library Preparation

Price on request
Request a quote for more information about this service.

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Haiping Hao

Associate Director
  • Positive review for SMRT Sequencing:

    April 2017

    "Haiping was very responsive and data was delivered on-time. Thanks!"

  • Positive review for Affymetrix RNA Microarray:

    November 2016

    "I was very much satisfied with the service. Samples were analyzed quickly and each of my questions was met with a prompt and satisfying answer. Changing the order by adding additional samples was no problem at all and so was adding new comparison groups after I received the results. I can recommend this service to anyone!"

  • Positive review for Illumina Sequencing:

    March 2013

    "Very competent and handling of all issues; excellent data quality for our MiSeq 2x150 bp project!"

Deep Sequencing and Microarray Core has not received any endorsements.